ZABRI

Main axis

Circulating and emerging zoonotic pathogens

Main objective

The Camargue, rich in biodiversity and a migratory crossroads between Africa, Europe and the Mediterranean, is a strategic area for studying the emergence of zoonotic diseases. In recent years, there has been a resurgence of viruses such as West Nile, Usutuor H5N1and the emergence of indigenous cases of Dengue, Chikungunya and Zikalinked to the introduction of the tiger mosquito. Any infectious epidemic begins with the repeated exposure of a host to a pathogen circulating in the environment. The Camargue combines dense microbial biodiversity with a high level of human activity (livestock farming, fishing, agriculture, tourism), creating numerous opportunities for contact and transmission. The area is also home to invertebrates that are key to the life cycles of many pathogens (mosquitoes, freshwater snails), underlining the importance of understanding how these pathogens are transmitted: where these infectious agents circulate, what reservoirs they have and what are the risks of exposure for humans and animals? This area is part of a One Health preventive approach One Healthintegrating human, animal and environmental health. It also addresses interrelated issues such as antibiotic resistancein line with local infectious risk dynamics.

Description of the work

Destoumieux-Garzón, D., Matthies-Wiesler, F., Bierne, N., Binot, A., Boissier, J., Devouge, A., Garric, J., Gruetzmacher, K., Grunau, C., Guégan, J.F., Hurtrez-Boussès, S., Huss, A., Morand, S., Palmer, C., Sarigiannis, D., Vermeulen, R., Barouki, R. (2022). Getting out of crises: Environmental, social-ecological and evolutionary research is needed to avoid future risks of pandemics. Environment International 158. https://doi.org/10.1016/j.envint.2021.106915

Peyre, M., Vourc'h, G., Lefrançois, T., Martin-Prével, Y., Soussana, J. F., & Roche, B. (2021). PREZODE: preventing zoonotic disease emergence. Lancet (London, England), 397(10276), 792.

Vittecoq, M., Gauduin, H., Oudart, T., Bertrand, O., Roche, B., Guillemain, M., & Boutron, O. (2017). Modeling the spread of avian influenza viruses in aquatic reservoirs: A novel hydrodynamic approach applied to the Rhône delta (southern France). Science of the Total Environment, 595, 787-800.

Listen to the media :
ANSES seminar - Mosquito vectors - Paris, 25 April 2024.

To find out more :
- IPBES (2020) Workshop Report on Biodiversity and Pandemics of the Intergovernmental Platform on Biodiversity and Ecosystem Services. Daszak, P., Amuasi, J., das Neves, C. G., Hayman, D., Kuiken, T., Roche, B., Zambrana-Torrelio, C., Buss, P., Dundarova, H., Feferholtz, Y., Foldvari, G., Igbinosa, E., Junglen, S., Liu, Q., Suzan, G., Uhart, M., Wannous, C., Woolaston, K., Mosig Reidl, P., O'Brien, K., Pascual, U., Stoett, P., Li, H., Ngo, H. T., IPBES secretariat, Bonn, Germany, DOI:10.5281/zenodo.4147317.

Laboratories involved

The ZOOCAM project (PREZODE 1) involves 7 research laboratories:

  • UMR MIVEGEC
  • UMR IHPE
  • UMR ISEM
  • UMR CEFE
  • UMR SENS
  • MSH Sud
  • and La Tour du Valat (private research institute)

Local players

In addition, there are collaborations with managers of natural areas where samples are taken for research purposes.

Preferred study sites

Nature reserves and parks

Academic coordinators

Frédéric Thomas

External presenters

And other external animators

Support projects

EXPRESSE-BIOCAM project

EXPRESSE-BIOCAM project

Summary The aim of the EXPRESSE-BIOCAM project is to explore the combined effects of environmental exposure, social inequalities and territorial transitions on mental health in the coastal socio-ecosystems of the Camargue delta. In an interdisciplinary approach rooted in One Health and extended to mental health, the project uses cross-disciplinary tools from geomatics, ecotoxicology, social sciences, public health, psychology and artificial intelligence. 

EXPRESSE-BIOCAM is run by UMR MIVEGEC and is part of the work of the Camargue Health and Environment Long-Term Socio-Ecological Research platform, namely the Zone Atelier « Santé-Environnement Camargue » in french (abbreviated ZACAM or LTSER ZACAM), research Infrastructure of the CNRS, in collaboration with academic, institutional, association and healthcare partners. This pilot project, based in a high-stakes region, is intended to be transferable to other contexts facing critical socio-ecological transitions.

A number of experiments are under way before the project is submitted in response to a targeted call for projects.

See, for example, news from ZACAM (participation in Unoc 3).

ZOOCAM (PEPR PREZODE)

ZOOCAM (PEPR PREZODE)

Summary The Camargue (Rhône Delta, France) is a temperate ecosystem that is conducive to the emergence and spread of zoonotic diseases. Faced with this challenge, and at a time when the One Health approach has focused mainly on tropical and intertropical regions, a CNRS Health-Environment-Camargue Workshop Zone is being set up. The aim is to bring together health-environment research in the Camargue using an integrative, interdisciplinary approach to provide local players with practical solutions. The ZOOCAM project aims to answer the following questions:

1) What are the dynamics of circulating/emerging zoonotic agents in the Camargue?

2) What human and environmental factors influence the spread of zoonotic agents?

3) Can current and emerging zoonotic risks be modelled/predicted?

4) How is the risk perceived by local stakeholders?

ZOOCAM is structured into several Work Packages (WP) dedicated to specific aspects of research. 

WP1This project, led by Fred Thomas and Pierre Becquart (MIVEGEC), is focusing on the study of mammalian viruses in the Camargue, particularly those present in bats, and on establishing a genomic map of these viruses. The aim is to understand which viruses could potentially be transmitted to humans and to monitor their evolution over time. The research also includes an extension to other local mammals, such as coypu and martens, in order to gain a better understanding of zoonotic vectors in the region.

WP2ZOOCAM, directed by Olivier Rey (IHPE), is looking at trematodes, parasites present in aquatic environments that have major health consequences for humans and domestic animals. Although little is known about these parasites, the research carried out as part of ZOOCAM aims to better anticipate trematode-related diseases in a context of environmental change, particularly as a result of increasing anthropisation and the use of pesticides in the Camargue rice fields.

WP3 led by Karen McCoy (MIVEGEC) is exploring the links between microplastic pollution and the vectorial capacity of certain organisms, such as mosquitoes, ticks and freshwater molluscs, on the Mediterranean coast. The aim is to analyse how these pollutants can influence the spread of disease through these biological vectors, an innovative approach that could open up new prospects for environmental and health management.

WP4 The ZOOCAM project, led by Emanuel Fronhofer (ISEM), focuses on modelling the risks associated with zoonoses. The main objective is to predict the evolution of zoonotic diseases as a function of ecological dynamics and interactions between animal species and their environment. WP4 also aims to integrate these results into a health management perspective, by providing tools and recommendations to local stakeholders to anticipate and prevent the risks associated with zoonoses, while promoting a sustainable approach to biodiversity.

The project's ambitions do not stop at fundamental research. ZOOCAM also aims to integrate its results into concrete actions in favour of territorial management and public health. The issue of co-constructing knowledge with local players is a key pillar of the project, implemented at the level of the WP5 directed by Raphaël Mathevet (CEFE). The management of zoonoses cannot be limited to a scientific approach; it requires the involvement of local users, be they farmers, managers of natural areas or local populations. The complexity of the interactions between biodiversity, health and society calls for concerted responses, in which participatory science plays a crucial role. A special effort is being made to raise awareness of zoonotic risks among local stakeholders, while stressing the importance of preserving biodiversity and benefiting from the ecosystem services it provides.

Finally, the ZOOCAM project stands out for its interdisciplinary and collaborative dimension, which is addressed in the WP6 led by Aurélie Binot (MSH Sud). Although the different work packages have been built relatively independently, there is a strong desire to break down barriers, with an effort to build a common epistemological framework between researchers from a variety of disciplines, such as biology, ecology and human and social sciences (SHS). The links between the work packages will gradually be strengthened, particularly in terms of sampling strategies, and also through the interactions between the vector models studied in work package 3 and the health risk analyses in work package 4.

A key aspect of ZOOCAM is its regional focus. The Camargue, with its biodiversity and wetlands, is a particularly suitable area for studying health/environment interactions, with a health ecology observatory and the Tour du Valat (TdV), a pioneering wetland conservation research centre that plays a central role in coordinating field research. In the project, this WP transverse is led by Marion Vittecoq (TdV). Thanks to this local dynamic, ZOOCAM benefits from in-depth local knowledge and solid partnerships with regional players.

ZOOCAM seeks to avoid a simplistic view of nature as a source of health hazards. On the contrary, the project aims to show that biodiversity, if properly managed, can be an asset for public health. This approach requires constant dialogue between scientists and local stakeholders, in particular to find sustainable solutions that reduce health risks while preserving ecosystems. For example, the involvement of WP5 and WP6 in the communication and coordination of scientific results with the social dynamics on the ground is a key dimension of this process.

In conclusion, ZOOCAM has established itself as a major research project on zoonoses and environmental health in the Camargue. Its strength lies in its interdisciplinary approach, its strong local roots and its desire to co-construct solutions with local stakeholders, strengthening the links between science, society and the sustainable management of biodiversity.

A major challenge lies in the ability of those involved in the project to decompartmentalise their approaches between WP and to integrate the heterogeneous knowledge that will be produced.

Authors: Frédéric Thomas (Project extracts), Aurélie Binot (Story draft extracts).

The Salt Trial (ERABLE Project)

The Salt Trial (ERABLE Project)

The Salt Trial is a territorial fiction that looks at salt as an environmental motif accused in a fictitious trial, inviting all the living people of the Camargue to testify. The trial is a unifying event, creating a shared narrative. This action-research project aims to break down the barriers between different approaches, by recognising and questioning a wide range of vernacular knowledge and know-how, and involving players from all sectors. It explores the possibilities for adapting and transforming human activities in the Camargue in the face of salinisation of the environment and climate change, and aims to trigger social change around the challenges of ecological transition. 

>>>>>>> En savoir plus

TransCam project

TransCam project

This exploratory project aims to analyse the multiple models of ecological transition at work in the Camargue. These models encompass initiatives with a strong environmental, economic and social impact, whose implementation is giving rise to lively debate and even public contestation, particularly around industrial, energy and carbon neutrality issues, but also other equally crucial challenges.

The Camargue, a wetland of international importance and a veritable biodiversity hotspot, is today at the heart of major environmental and social tensions, exacerbated by climate change. These rapid dynamics are accentuating the controversies surrounding the economic, ecological and recreational uses of the land, making the region a prime observation ground for the challenges of the ecological transition on Mediterranean coasts.

In this context, the project proposes to examine the trajectories, players and meanings associated with these different transitions. The aim is to produce a precise, contextualised and critical definition of these processes in the Camargue.

This analysis is particularly strategic for the development of the ZACAM. It will serve as a starting point ('point zero') for long-term monitoring of the dynamics of ecological transition. The project aims to work with local stakeholders to develop an integrated approach to research issues and resources, optimising monitoring systems, exploring the impact on mental health, and refocusing research on the most salient issues in the area.

Theses, post-doctorates and Master's internships

Masters 2 course
ZOOCAM course (WP4 - 2025) 2

ZOOCAM course (WP4 - 2025) 2

Project ZOOCAM

>>>>>>

Related Master 2 courses

This internship looked at the biodiversity of temporary Mediterranean ponds using environmental DNA analyses, targeting bacteria and eukaryotes. The study revealed that factors such as salinity, temperature and human impact influence diversity at different spatial scales. However, no clear link was found between biodiversity and the decomposition of organic matter. Spatial analysis proved relevant, but remote sensing was unable to detect hydroperiods effectively. These results underline the importance of spatialised and integrative approaches to better understand these vulnerable ecosystems..

Masters 2 course
ZOOCAM course (WP4 - 2025) 1

ZOOCAM course (WP4 - 2025) 1

Project ZOOCAM

>>>>>>

Related Master 2 courses

This course explores zoonotic risks in the Camargue by studying the diversity of pathogens, parasites and vectors (PPV) in different environments. The analysis highlights the influence of environmental factors (temperature, salinity, land use, human impact) on the distribution of PPVs. Some notable pathogens, such as Coxiella burnetii were detected. The results also highlight the importance of future monitoring of antimicrobial resistance. This research is helping us to better anticipate health risks in this area of high ecological and agricultural importance..

(Course from 06/01/2025 to 27/06/2025)

Masters 2 course
TransCam 2025 course

TransCam 2025 course

TRANSCAM project

>>>>>>

Related Master 2 courses

The aim of this course is to document ecological transitions in the Camargue. It is based mainly on two methodological approaches: a literature review and semi-structured interviews. It began with an in-depth review of the scientific and grey literature in order to update our knowledge of the dynamics of ecological transitions. This phase also enabled us to identify the associated public policies and approaches. Interviews will then be conducted with local stakeholders to gather their views, motivations and experiences regarding the transitions underway. These interviews will be transcribed in full and analysed qualitatively. This work requires a reflective and interdisciplinary approach. This will contribute to a better understanding of territorial trajectories and the means of measuring them. This internship will also strengthen the project's capacity to structure a research base for long-term monitoring of transitions.